Hypergeometric test, 0 vs. non-0, on columns of a dataframe

Originally used for scRNA gene co-expression analysis

Usage

phyper_df(df, A, B)

Arguments

df

dataframe; includes columns "A" and "B"

A

string; colname for values A

B

string; colname for values B

Value

single dataframe row with A&B names, phyper inputs, pvalues